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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs73730437 chr6:36036512 C/T 1.09E-9 404 15.63 15.13 6.15 KM Plot
LGG rs73730440 chr6:36037226 A/G 1.02E-9 405 15.67 15.13 6.15 KM Plot
LGG rs73730459 chr6:36085003 A/G 9.55E-15 407 15.57 15.17 5.3 KM Plot
LGG rs73870936 chr3:153674502 T/C 0 405 15.15 16.77 0.23 KM Plot
LGG rs73870937 chr3:153674504 C/T 0 405 15.15 16.77 0.23 KM Plot
LGG rs739402 chr11:3036613 C/T 0.000215 407 15.67 14.73 11.37 KM Plot
LGG rs73950411 chr18:33443506 A/C 8.87E-5 404 15.88 14.77 8.07 KM Plot
LGG rs73996235 chr2:228084579 T/C 0 407 15.72 13.23 1.23 KM Plot
LGG rs73996238 chr2:228091706 T/C 0 406 15.7 14.43 1.27 KM Plot
LGG rs73996239 chr2:228091929 G/A 0 406 15.7 14.43 1.27 KM Plot
LGG rs74003560 chr16:4947927 G/A 2.5E-6 402 15.17 15.97 7.8 KM Plot
LGG rs74003562 chr16:4947953 G/A 3.26E-6 401 15.18 15.97 7.8 KM Plot
LGG rs74026418 chr16:67690633 C/A 2.77E-11 407 15.17 18.37 6.47 KM Plot
LGG rs74026419 chr16:67690634 T/G 2.77E-11 407 15.17 18.37 6.47 KM Plot
LGG rs74048785 chr11:3078188 C/T 8.25E-5 400 15.73 14.73 15.53 KM Plot